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Genetic diversity in Indonesian shallot (Allium cepa var. ascalonicum) and Allium x wakegi revealed by RAPD markers and origin of A. x wakegi identified by RFLP analyses of amplified chloroplast genes

Arifin, N.S.; Ozaki, Y.; Okubo, H.

Euphytica 111(1): 23-31

2000


ISSN/ISBN: 0014-2336
DOI: 10.1023/a:1003732403402
Accession: 003454979

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RAPD and PCR-RFLP analyses were conducted to establish the phylogenetic relationships among collected accessions of shallot (Allium cepa var. ascalonicum and Allium x wakegi, and to assess the origin of A. x wakegi. Twenty out of 100 primers were amplified with 112 scorable bands for cluster analysis. Two main cluster groups consisting of one group for shallot and another group for A. x wakegi were clearly separated.

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