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Using WormBase ParaSite: An Integrated Platform for Exploring Helminth Genomic Data



Using WormBase ParaSite: An Integrated Platform for Exploring Helminth Genomic Data



Methods in Molecular Biology 1757: 471-491



WormBase ParaSite ( parasite.wormbase.org ) is a comprehensive resource for the genomes of parasitic nematodes and flatworms (helminths). It currently includes genomic data for over 100 helminth species, adding value by way of consistent functional annotation, gene comparative analysis and gene expression analysis. We provide several ways of exploring the data including a choice of genome browsers, genome and gene summary pages, text and sequence searching, a query wizard, bulk downloads, and programmatic interfaces. WormBase ParaSite is released three to six times per year, and is developed in collaboration with WormBase ( www.wormbase.org ) and Ensembl Genomes ( www.ensemblgenomes.org ).

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Accession: 065660250

Download citation: RISBibTeXText

PMID: 29761467

DOI: 10.1007/978-1-4939-7737-6_15


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